miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|112354974|gb|AM390953.1|AM390953 GCGTCCGCGGNNNCGTGGGGTTTCTAAAAAAAATCAAGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATCT
TACTTGAGAGATGAAGATCTGACACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGAG
CCAAATGTATCAGTTTCAAGGACGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGG
CCAAAGATTCCGACATTATCCTCGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATT
AACCGACACAAGTTTCCAGTTTCTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGA
AGGAGTTTACTACGAGTCTCCAAATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTC
TTTCCCTGCCCGAGTCCGTTAAGAGCTCCTCTTGTAAGATTGTGTATTNNNGTAGGAACCCTAAGGACATGTTTGTGTCC
TTATGGCATTTT




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  293 bits (750), Expect = 5e-79
 Identities = 142/165 (86%), Positives = 153/165 (92%), Gaps = 1/165 (0%)
 Frame = +3

Query: 81  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 260
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 261 LVTNPKSGTTWLKALVFSLINRHKFPV-SSGDHPLLVTNPHLLIPFLEGVYYESPNFDFT 437
           LVTNPKSGTTWLKALVF+L+NRHKFPV SSG+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 438 ELPSPRLMNTHISLLSLPESVKSSSCKIVYXXRNPKDMFVSLWHF 572
            LPSPRLMNTHIS LSLPESVKSSSCKIVY  RNPKDMFVSLWHF
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHF 174